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Difference between revisions of "COVID-19"
(→‎Data Sources (pandemic))
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__NOTOC__
 
__NOTOC__
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<html>
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  <head>
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    <!--Load the AJAX API-->
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    <script type="text/javascript" src="https://www.gstatic.com/charts/loader.js"></script>
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    <script type="text/javascript">
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 +
      google.charts.load('current', {'packages':['corechart']});
 +
      google.charts.setOnLoadCallback(drawVisualization);
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 +
      function drawVisualization() {
 +
        // Some raw data (not necessarily accurate)
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        var data = google.visualization.arrayToDataTable([
 +
          ['Day', 'Cumulative', 'Daily'],
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        // Day 1 = March 10, 2020
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[1, 1, 1],
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[2, 1, 0],
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[3, 5, 4],
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[4, 5, 0],
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[5, 6, 1],
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[6, 18, 12],
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[7, 47, 29],
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[8, 98, 51],
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[9, 192, 94],
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[10, 359, 167],
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[11, 670, 311],
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[12, 947, 277],
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[13, 1236, 289],
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[14, 1529, 293],
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[15, 1872, 343],
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[16, 2433, 561],
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[17, 3629, 1196],
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[18, 5698, 2069],
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[19, 7402, 1704],
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[20, 9217, 1815],
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[21, 10827, 1410],
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[22, 13531, 2904],
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[23, 15679, 2148],
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[24, 18135, 2456],
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[25, 20921, 2786],
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[26, 23934, 3013],
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[27, 27069, 3135],
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[28, 30217, 3148],
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[29, 34109, 3892],
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[30, 38226, 4117],
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[31, 42282, 4056],
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[32, 47029, 4747],
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[33, 52167, 5138],
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[34, 56956, 4789],
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[35, 61049, 4093],
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[36, 65111, 4062],
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[37, 69392, 4281],
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[38, 74193, 4801],
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[39, 78546, 4353],
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[40, 82329, 3783],
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[41, 86306, 3977],
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[42, 90980, 4674],
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[43, 95591, 4611],
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[44, 98674, 3083],
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[45, 101790, 3116],
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]);
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// Set chart options
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        var options = {
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          title : 'COVID-19 Cases in Turkey',
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fontName: 'Old Standard TT',
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vAxis: {
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          title: 'Cases',
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//          maxValue: '20000',
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// scaleType: 'log',
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            },
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          hAxis: {title: 'Day'},
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          seriesType: 'bars',
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          series:{
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          0: {type: 'line',
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            color: '#982F00',
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                lineWidth: 3,
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//              pointSize: 4,
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                },
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          1: {type: 'bars', color: 'black'},},
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//        'width':600,
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          'height':400,
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//        crosshair: { trigger: 'both', opacity: 0.5 },
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//        trendlines: { 1: {} }    // Draw a trendline for data series 1,
 +
          };
 +
 +
        var chart = new google.visualization.ComboChart(document.getElementById('chart_div_1'));
 +
        chart.draw(data, options);
 +
      }
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    </script>
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  </head>
 +
 +
<body>
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<div id="chart_div_1"></div>
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</body>
 +
</html>
 +
 
==SARS-CoV-2, The Virus==
 
==SARS-CoV-2, The Virus==
  

Revision as of 12:46, 29 April 2020

SARS-CoV-2, The Virus

Inside the Coronavirus Genome by J. Corum and C. Zimmer, April 3, 2020 — NY Times
— The genome of the new coronavirus is less than 30,000 letters long, while the human genome is over 3 billion. Scientists have identified genes for as many as 29 proteins, which carry out a range of jobs from making copies of the coronavirus to suppressing the body’s immune responses.

Genetic Data for SARS-CoV-2, April 12, 2020 — Wolfram
— This interactive dashboard displays recent information on the COVID-19 (coronavirus) pandemic, patient symptoms and outcomes, and the genetic makeup of the novel coronavirus (SARS-CoV-2).

Data Sources (pandemic)

How do sources compare? by H. Ritchie et al., March 19, 2020 — Our World in Data
— There are three key sources providing regular updates of COVID-19 cases and deaths globally and by country.

NOTE: Script for downloading the CSV file into R 

1 #these libraries need to be loaded
2 library(utils)
3 
4 #read the Dataset sheet into “R”. The dataset will be called "data".
5 data <- read.csv("https://opendata.ecdc.europa.eu/covid19/casedistribution/csv", na.strings = "", fileEncoding = "UTF-8-BOM")

Data Sources (other)

Datasets

Updates

Observable

Shiny

Tableau

Research

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