Difference between revisions of "COVID-19"


Line 93: Line 93:
 
<body>
 
<body>
 
<div id="chart_div_1"></div>
 
<div id="chart_div_1"></div>
 +
</body>
 +
</html>
 +
 +
<html>
 +
  <head>
 +
    <!--Load the AJAX API-->
 +
    <script type="text/javascript" src="https://www.gstatic.com/charts/loader.js"></script>
 +
    <script type="text/javascript">
 +
 +
      google.charts.load('current', {'packages':['corechart']});
 +
      google.charts.setOnLoadCallback(drawChart);
 +
 +
      function drawChart() {
 +
        var data = google.visualization.arrayToDataTable([
 +
          ['Total cases', 'Daily cases'],
 +
//[1, 1],
 +
//[1, 0],
 +
//[5, 4],
 +
//[5, 0],
 +
//[6, 1],
 +
//[18, 12],
 +
//[47, 29],
 +
//[98, 51],
 +
[192, 94],
 +
[359, 167],
 +
[670, 311],
 +
[947, 277],
 +
[1236, 289],
 +
[ 1529, 293],
 +
[ 1872, 343],
 +
[ 2433, 561],
 +
[ 3629, 1196],
 +
[ 5698, 2069],
 +
[ 7402, 1704],
 +
[ 9217, 1815],
 +
[ 10827, 1410],
 +
[ 13531, 2904],
 +
[ 15679, 2148],
 +
[ 18135, 2456],
 +
[ 20921, 2786],
 +
[23934, 3013],
 +
[27069, 3135],
 +
[30217, 3148],
 +
[34109, 3892],
 +
[38226, 4117],
 +
[42282, 4056],
 +
[47029, 4747],
 +
[52167, 5138],
 +
[56956, 4789],
 +
[61049, 4093],
 +
[65111, 4062],
 +
[69392, 4281],
 +
[74193, 4801],
 +
[78546, 4353],
 +
[82329, 3783],
 +
[86306, 3977],
 +
[90980, 4674],
 +
[95591, 4611],
 +
[98674, 3083],
 +
[101790, 3116],
 +
        ]);
 +
 +
        var options = {
 +
          title: 'Total cases vs. Daily cases (log-log)',
 +
          fontName: 'Old Standard TT',
 +
          color: '#982F00',
 +
          series:{
 +
          0: {
 +
            color: '#982F00',
 +
                pointSize: 2,
 +
                },},
 +
          hAxis: {title: 'Total cases', scaleType: 'log'},
 +
          vAxis: {title: 'Daily cases', scaleType: 'log'},
 +
          legend: 'none',
 +
          'height':400,
 +
        };
 +
 +
        var chart = new google.visualization.ScatterChart(document.getElementById('chart_div_2'));
 +
 +
        chart.draw(data, options);
 +
      }
 +
    </script>
 +
  </head>
 +
 +
<body>
 +
<div id="chart_div_2"></div>
 
</body>
 
</body>
 
</html>
 
</html>

Revision as of 12:52, 29 April 2020

SARS-CoV-2, The Virus

Inside the Coronavirus Genome by J. Corum and C. Zimmer, April 3, 2020 — NY Times
— The genome of the new coronavirus is less than 30,000 letters long, while the human genome is over 3 billion. Scientists have identified genes for as many as 29 proteins, which carry out a range of jobs from making copies of the coronavirus to suppressing the body’s immune responses.

Genetic Data for SARS-CoV-2, April 12, 2020 — Wolfram
— This interactive dashboard displays recent information on the COVID-19 (coronavirus) pandemic, patient symptoms and outcomes, and the genetic makeup of the novel coronavirus (SARS-CoV-2).


Data Sources (pandemic)

How do sources compare? by H. Ritchie et al., March 19, 2020 — Our World in Data
— There are three key sources providing regular updates of COVID-19 cases and deaths globally and by country.

NOTE: Script for downloading the CSV file into R

1 #these libraries need to be loaded
2 library(utils)
3 
4 #read the Dataset sheet into “R”. The dataset will be called "data".
5 data <- read.csv("https://opendata.ecdc.europa.eu/covid19/casedistribution/csv", na.strings = "", fileEncoding = "UTF-8-BOM")

Data Sources (other)


Datasets


Updates


Observable


Shiny


Tableau



Research